tasks.workflows
¶
Workflow tasks.
Module Contents¶
Classes¶
Run Curation phase. |
|
Run Annotation phase. |
|
Run Repair phase. |
Functions¶
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Build the path to the reduced version of the report. |
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Save reduced version of the report. |
- tasks.workflows.path_reduced_df(data_dir, df_path='reduced_df.csv', parents=None)¶
Build the path to the reduced version of the report.
- tasks.workflows.save_reduced_df(df, data_dir, df_path='reduced_df.csv', parents=None)¶
Save reduced version of the report.
- class tasks.workflows.Curate(*args, **kwargs)¶
Bases:
morphology_workflows.utils.StrIndexMixin
,data_validation_framework.task.ValidationWorkflow
Run Curation phase.
The complete phase has the following dependency graph:
(click on steps in the image for more details)
- class tasks.workflows.Annotate(*args, **kwargs)¶
Bases:
morphology_workflows.utils.StrIndexMixin
,data_validation_framework.task.ValidationWorkflow
Run Annotation phase.
The complete phase has the following dependency graph:
(click on steps in the image for more details)
- class tasks.workflows.Repair(*args, **kwargs)¶
Bases:
morphology_workflows.utils.StrIndexMixin
,data_validation_framework.task.ValidationWorkflow
Run Repair phase.
The complete phase has the following dependency graph:
(click on steps in the image for more details)
- make_release¶
Set to True to make a morpology release with neurondb.xml
- Type:
- Default value:
True
- report_config¶