tasks.fetch
¶
Tasks to fetch morphologies.
Module Contents¶
Classes¶
Fetch morphologies from the given source. |
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tasks.fetch.
logger
¶
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class
tasks.fetch.
FetchMorphologies
(*args, **kwargs)¶ Bases:
luigi_tools.task.WorkflowTask
Fetch morphologies from the given source.
The JSON configuration file should contain a list of objects where each object is a config set:
[ { "brain_region": "AHN", "nb_morphologies": 2, "seed": 0 }, { "brain_region": "VISp", "nb_morphologies": 2, "seed": 0 } ]
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source
¶ The source used to download the morphologies
- Type
- Choices
{NeuroMorpho, MouseLight, Allen, BBP-Nexus}
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neuromorpho_download
(self, config)¶ Download morphologies from the NeuromMorpho.org database.
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mouselight_download
(self, config)¶ Download morphologies from the MouseLight database.
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allen_download
(self, config)¶ Download morphologies from the Allen database.
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