morphology_workflows.marker_helper
¶
Module to read/write/plot morphology markers.
Module Contents¶
Classes¶
Container of several markers for a single morphology. |
|
Container of a single marker. |
-
morphology_workflows.marker_helper.
logger
¶
-
class
morphology_workflows.marker_helper.
MarkerSet
¶ Container of several markers for a single morphology.
-
classmethod
from_markers
(cls, markers)¶ Load from a list of Marker object.
-
static
check_labels
(markers)¶ Ensure label names are different.
-
classmethod
from_file
(cls, marker_path)¶ Load maker yaml file.
-
classmethod
from_dicts
(cls, markers)¶ Load marker from dict, where markers[“markers”] is a list of dict markers.
-
plot
(self, filename='markers.html', with_plotly=True, plane='3d', **kwargs)¶ Plot morphology with markers.
-
to_dicts
(self)¶ Create a list of dicts from marker class.
-
classmethod