Changelog

0.4.2

13 December 2022

Chores And Housekeeping

  • Remove dead code in conf.py (Adrien Berchet - #68)

  • Bump AllenSDK and Sphinx and use proper optional parameters (Adrien Berchet - #67)

  • Fix language detection (Adrien Berchet - #64)

CI Improvements

  • Use tox 4 (Adrien Berchet - #70)

  • Apply Copier template (Adrien Berchet - #69)

Uncategorized Changes

  • Update README.md (alex4200 - 53b70d4)

0.4.1

22 September 2022

Refactoring and Updates

  • Update from template (Adrien Berchet - #58)

  • Apply Copier template (Adrien Berchet - #57)

CI Improvements

  • Setup pre-commit and format the files accordingly (Adrien Berchet - #55)

  • Fix action to publish new releases on Pypi (Adrien Berchet - #54)

Uncategorized Changes

  • Reconnect axons to soma (Alexis Arnaudon - #62)

  • Simpler smooth algorithm (Alexis Arnaudon - #56)

  • Add duplicate layers to releases (Alexis Arnaudon - #60)

  • Fail if spaces in morph name (Alexis Arnaudon - #59)

0.4.0

11 August 2022

Chores And Housekeeping

  • Set mtype_regex argument as optional (Adrien Berchet - #52)

Documentation Changes

  • Improve doc for the Fetch workflow (Adrien Berchet - #51)

  • Add the Placeholders workflow in the doc (Adrien Berchet - #49)

  • Improve instructions to create inputs (Adrien Berchet - #47)

Uncategorized Changes

  • Remove warning from scipy (Adrien Berchet - #48)

  • Add workflow to compute placeholders (Adrien Berchet - #22)

CI Improvements

  • Use commitlint to check PR titles (#45) (Adrien Berchet - 4d9c3df)

0.3.2

1 July 2022

  • Improve test coverage (Adrien Berchet - #40)

  • Use luigi features moved from luigi-tools (Adrien Berchet - #42)

  • Fix task arguments in CLI and use new empty dependency graph feature of luigi-tools (Adrien Berchet - #41)

  • Improve MakeRelease and minor changes (Alexis Arnaudon - #11)

  • Constrain requirements for Jinja2 and Numpy (Adrien Berchet - #38)

0.3.1

17 June 2022

  • Ensure 0-length sections are always fixed, even if the min length is too small (Adrien Berchet - #35)

0.3.0

14 June 2022

  • Build and publish wheels (Adrien Berchet - #32)

  • Fix 0-length root sections in CheckNeurites task (arnaudon - #31)

  • Fix SSL certificate in example (Alexis Arnaudon - #23)

  • Fix optional imports (Adrien Berchet - #27)

  • Fetch morphologies workflow (Adrien Berchet - #20)

  • cleanup example (Alexis Arnaudon - #17)

  • Add link to the documentation into README.md (Adrien Berchet - #16)

  • Add banner to repo (alex4200 - #13)

  • Adding logo for Morphology-Workflows (alex4200 - #12)

  • Missed fix (#18) (Alexis Arnaudon - 3a9b56f)

  • Ensure axon stub (#26) (arnaudon - 7e7f750)

  • Updating copyright year (adietz - 9b662e5)

0.2.0

12 January 2022

  • Use the new input mechanism for DVF inputs (Adrien Berchet - #8)

0.1.3

20 December 2021

  • Use the SkippableMixin from DVF (Adrien Berchet - #1)

0.1.2

20 December 2021

  • Fix Pypi variable (Adrien Berchet - #3)

0.1.1

20 December 2021

  • Generate workflow images during sphinx build (Adrien Berchet - #2)

0.1.0

16 December 2021

  • Open source the Curate, Annotate and Repair workflows from the morphology-processing-workflow package (Adrien Berchet - ccd4854)